Book Chapter

  1. Halil Bisgin, Nitin Agarwal, and Xiaowei Xu. A Study of Homophily on Social Media, Social Network Mining, Analysis and Research Trends: Techniques and Applications. Editors: I-Hsien Ting, Tzung-Pei Hong and Leon S.L. Wang. IGI Global, 2011. ( News Coverage: UALR News)

Journal Papers

  1. Halil Bisgin , Talha Oz, and Rachael Havens. A study on attribution of blame and responsibility in disaster recovery in the case of #FlintWaterCrisis, Frontiers in Communication- Disaster Communications. 3:45
  2. Halil Bisgin, Tanmay Bera, Hongjian Ding, Howard G. Semey, Leihong Wu, Zhichao Liu, Amy E. Barnes, Darryl A. Langley, Monica Pava-Ripoll, Himansu J. Vyas, Weida Tong, Joshua Xu. Comparing SVM and ANN based Machine Learning Methods for Species Identification of Food Contaminating Beetles, Scientific Reports, 8.1 (2018): 6532
  3. Halil Bisgin, Yuping Wang, Binsheng Gong, Weida Tong. Evaluation of bioinformatics choices for next-generation sequencing analysis of microRNAs, Frontiers in Genetics 9 (2018): 22
  4. Harsh Dweep, Yuji Morikawa, Binsheng Gong, Jian Yan, Tao Chen, Zhichao Liu, Christina Castro, Halil Bisgin, Wen Zou, Huixiao Hong, Tieliu Shi, Ping Gong, Takeki Uehara, Yuping Wang, Weida Tong. Mechanistic Roles of miRNAs in Hepatocarcinogenesis at Rats Treated with a Non Genotoxic Carcinogen, Scientific Reports, 7.1 (2017):3054.
  5. Su Inn Park, Joshua Xu, Halil Bisgin, Hongjian Ding, Howard Semey. Species Identification of Food Contaminating Beetles by Recognizing Patterns in Microscopic Images of Elytra Fragments, PLoS ONE, 11:1-22, 2016
  6. Halil Bisgin, Zhichao Liu, Reagan Kelly, Hong Fang, Xiaowei Xu, Weida Tong. A phenome-guided drug repositioning through a latent model, BMC Bioinformatics, 15:267, 2014.
  7. Minjun Chen, Halil Bisgin, Lillian J. Tong, Huixiao Hong, Hong Fang, Weida Tong. Toward Predictive Models for Drug-induced Liver Injury in Humans: Are We There Yet?, Biomarkers in Medicine, 8(2):201-213, 2014.
  8. Halil Bisgin, Minjun Chen, Yuping Wang, Reagan Kelly, Hong Fang, Xiaowei Xu, Weida Tong. A Systems Approach for Analysis of High Content Screening Assay Data with Topic Modeling, BMC Bioinformatics, 14(S11), 2013.
  9. Halil Bisgin, Zhichao Liu, Reagan Kelly, Hong Fang, Xiaowei Xu, Weida Tong. Investigating drug repositioning opportunities in FDA drug labels through topic modeling, BMC Bioinformatics, 13(S6), 2012.
  10. Halil Bisgin, Zhichao Liu, Hong Fang, Xiaowei Xu, Weida Tong. Mining FDA Drug Labels using unsupervised learning technique -Topic Modeling, BMC Bioinformatics, 12(S11), 2011. (2011 Impact Factor: 3.03)
  11. Halil Bisgin, Orhan Kilinc, Ahmet Ugur, Xiaowei Xu, Volkan Tuzcu. Diagnosis of Long QT Syndrome via Support Vector Machine Classification, Journal of Biomedical Science and Engineering, 4(4): 264-271, April, 2011.
  12. Halil Bisgin, Nitin Agarwal, and Xiaowei Xu. A Study of Homophily on Social Media, WorldWide Web, 15(2):213-232, 2012. (top 4th journal in Computer Science that focuses on Web Science Research)

Conference Proceedings

  1. Hasan Arslan, Halil Bisgin. Decoding the Language and the Patterns in ISIS Magazine: Dabiq.
  2.  Halil Bisgin, Murali Mani, and Suleyman Uludag. Delineating relevant factors in student success in a CS2 style data structures course (Frontiers in Education (FIE), 2018.
  3. Fadi Mohsen, Hamed Abdelhaq, Halil Bisgin, Andrew Jolly, and Michael Szczepanski. Countering Intrusiveness Using New Security-Centric Ranking Algorithm Built On Top of Elasticsearch. 17th IEEE International Conference On Trust, Security And Privacy In Computing And Communications.
  4. Fadi Mohsen, Halil Bisgin , Zachary Scott, and Kyle Strait. Detecting Android Malwares by Mining Statically Registered Broadcast Receivers. In Collaboration and Internet Computing (CIC), 2017 IEEE 3rd International Conference on, pp. 67-76. IEEE, 2017.
  5. Talha Oz and Halil Bisgin. Attribution of Responsibility and Blame Regarding a Manmade Disaster: #FlintWaterCrisis. 4th International Workshop on Social Web for Disaster Management (SWDM’16) held in conjunction with the 25th Conference on Information and Knowledge Management (CIKM 2016). October 24-28, 2016, Indianapolis, IN, USA.
  6. M. Venkata Swamy, Stephen Wallace, Halil Bisgin, Nitin Agarwal, Xiaowei Xu, and Hemant Joshi. NMiner: A System for Finding Related Entities by Mining a Bimodal Network. 8th Asia Information Retrieval Societies Conference (AIRS 2012). December 17-19, 2012, Tianjin, China.
  7. Fatih Sen, Rolf T. Wigand, Nitin Agarwal, Debanjan Mahata, and Halil Bisgin. Identifying focal patterns in social networks. 4th International Conference on Computational Aspects of Social Networks (CASoN 2012). November 21-23, 2012, Sao Carlos, Brazil.
  8. M. Venkata Swamy, Halil Bisgin, Stephen Wallace, Nitin Agarwal, Xiaowei Xu, and Hemant Joshi. UALR at TREC 2011 Entity Track. 20th Text REtrieval Conference (TREC 2011). November 15-18, 2011, Gaithersburg, Maryland.
  9. Halil Bisgin, Nitin Agarwal, and Xiaowei Xu. Does Similarity Breed Connection? – An Investigation in BlogCatalog and Last.fm Communities. 2nd International Symposium on Social Computing Applications (SCA-10) held in conjunction with the 2nd IEEE International Conference on Social Computing (SocialCom10). August 20-22, 2010, Minneapolis, MN.
  10. Halil Bisgin, Nitin Agarwal, and Xiaowei Xu. Investigating Homophily in Online Social Networks. The 10th IEEE/WIC/ACM International Conference on Web Intelligence (WI10). August 31 – September 3, 2010, Toronto, Canada.
  11. Halil Bisgin, Nitin Agarwal, and Xiaowei Xu. Does Similarity breed Connection? – An Investigation in BlogCatalog and Last.fm Communities. The 4th ACM Workshop on Social
  12. Network Mining and Analysis (SNAKDD) held in conjunction with the 16th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (KDD 2010). July 25, 2010, Washington DC, USA.
  13. Xiaowei Xu, Mutlu Mete, Halil Bisgin, Kemal Aydin, Nitin Agarwal, and Thomas A.J. Schweiger. Finding Community Leaders in Social Networks. The 4th ACM Workshop on
  14. Social Network Mining and Analysis (SNAKDD) held in conjunction with the 16th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (KDD 2010). July 25, 2010, Washington DC, USA.

Posters/Talks

  1. Rachael Havens, Halil Bisgin. A Study on the Contagion of Complaining in the Case of #FlintWaterCrisis. Flint Student Research Conference. April 6, 2018. Flint, Michigan
  2. Zachary Polikarpus, Daniel Lunsford, Suleyman Uludag, and Halil Bisgin. Performance Evaluation of Lightweight Hash Functions using Raspberry PI devices. Flint Student Research Conference. April 6, 2018. Flint, Michigan
  3. Yusuf Korkmaz, Halil Bisgin, Hasan T. Arslan. Discovering propaganda motifs in ISIS jihadi texts. Flint Student Research Conference. April 6, 2018. Flint, Michigan
  4. Yusuf Korkmaz, Suleyman Uludag, Halil Bisgin. Preliminary Formulation of a Blockchainbased Distributed and Fully Trustable Energy Market for the Smart Grid. Flint Student Research Conference. April 6, 2018. Flint, Michigan
  5.  Andrew Mrazik, Halil Bisgin, Ali Yilmaz, Onur Turkoglu, Eric Sherman, Stewart F. Graham,
    Anthony Odibo, Ray O. Bahado-Singh. A Metabolomics-Based Machine Learning Approach for the Early Diagnosis of Intrauterine Growth Restriction. Flint Student Research Conference. April 6, 2018. Flint, Michigan
  6. Monisha Puttaraju and Halil Bisgin. A probabilistic framework for identifying drug-drug interactions and primary suspect drugs for multi-drug treatment settings. 13th Annual Conference of the MidSouth Computational Biology and Bioinformatics Society  Mar 3-5, 2016. Memphis,TN
  7.  Halil Bisgin , Joshua Xu, Binsheng Gong, Zhichao Liu, Hong Fang, Leming Shi, Weida Tong. Exploring Rat RNA-Seq transcriptomic BodyMap through Topic Modeling. 10th Annual Conference of the MidSouth Computational Biology and Bioinformatics Society , March 6-18, 2014 (MCBIOS 2014), Stillwater, Oklahoma
  8. Halil Bisgin , Zhichao Liu,Reagan Kelly, Hong Fang, Xiaowei Xu, Weida Tong. A phenome-guided drug repositioning through a latent model. Conference on Semantics in Healthcare and Life Sciences , Feb 26-28, 2014 (CSHALS 2014), Boston, Massachusetts
  9. Halil Bisgin , Zhichao Liu, Hong Fang, Weida Tong, Xiaowei Xu. Mining FDA Drug Labels using unsupervised learning technique -Topic Modeling. 8th Annual Conference of the Mid-South Computational Biology and Bioinformatics Society , April 1-2, 2011 (MCBIOS 2011), College Station, Texas
  10. Halil Bisgin , Orhan Kilinc, Ahmet Ugur, Xiaowei Xu, Volkan Tuzcu. Diagnosis of Long QT Syndrome via Support Vector Machine Classication. 7th Annual Conference of the MidSouth Computational Biology and Bioinformatics Society , February 19-20, 2010 (MCBIOS 2010), Jonesboro, Arkansas
  11. Halil Bisgin , H. Nuzhet Dalfes. Parallel Clustering Algorithms with Application to Climatology. EGU General Assembly , 2008, Vienna, Austria.